Fursty;
I think the underlying problem is that SCM treats each service pack as a different product. SCM does this becuase that's the way the System Center Configuration Manager and most SCAP-based compliance tools behave. I know that this makes using SCM for managing
group policies more complex, but its a compromise that our developers had to make in order to generate reliable comliance data.
I'm not sure how well it would work, you could try exporting the SP1 baseline as a GPO, then import the GPO and associate it with Win2008 SP2, then merge that imported baseline with the other SP2 baseline.
Regards,
Kurt
Kurt Dillard http://www.kurtdillard.com