Hello,
These are the top results of if you google for App-V snagit. Some describe the entire process (as you explicitely requested), others deal with minor tweaks necessary for a process that one could assume would apply to any best practice sequence attempt.
http://www.itninja.com/software/techsmith/snagit/10-369
http://social.technet.microsoft.com/Forums/en-US/f958358d-b879-4ff2-92bc-052c5396ff65/problems-appv-sequencing-snagit-v11?forum=mdopappv
http://www.richud.com/wiki/AppV_Recipes
For the benefit of others, perhaps you could share how you sequence it?
Nicke Källén | The Knack| Twitter:
@Znackattack